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MEBI 534 , Autumn 2008
Biology and Informatics

Class Notes and Assignments 

Unless otherwise specified, all assignments should be completed PRIOR to the class with which they are associated.

Class Project due at the end of the day Dec 8
Class Presentations
Weekly Writing Assignments
Midterm

Week 1

  • Class 1 Introduction 
    Slides


Week 2

Week 3

Week 4


Week 5

  • Class 2 Pathway databases and simulation
    Assignment


Week 6

Week 7

Week 8

  • Class 1 No reading or Class, AMIA
  • Class 2 No reading or Class, AMIA
    Assignment: Find one five page paper at the 2008 or earlier AMIA conference that is relevant to at least one topic in this course. Write a half-page summary of that paper and explain how it relates to the topic.

Week 9

Week 10

  • Class 2 Systems biology and data integration
    Assignment
Week 11
  • Class 1 Pathology and Cancer
    Reading: 
    Cancer, Chapter 23 in Alberts 4th edition (online), or scanned pdf

  • Class 2 Cancer informatics
    Assignment

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 Last Updated:
11/26/08

Contact the instructor at: brinkley@u.washington.edu