Seedpod A model-driven data management tool X_Batch A toolbox developed for batch processing of functional MRI data in SPM2. It utilizes Dartmouth fMRI Data Management Tool to document file processing steps. All information is stored in Protege ontology software. XBrain The XBrain project is designed to allow fellow researchers to query SIG's Brain Mapping Database. The query language to use is XQuery, and the results are turned in XML. Written in JSP. MindSeer Formerly BrainJ3D.  It is a visualization tool for multimodality brain imaging data.  It includes a high-performance standalone version and a client/server mode for use with a central data repository. DXBrain DXBrain is a lightweight distributed data integration system for the UW Human Brain Project data network. Data sources are integrated at the query level, via distributed XQueries. DXQP The Distributed XQuery Processor (DXQP) takes XQueries as input, breaks them down into targetted query snippets, sends these queries snippets to the appropriate source wrappers, and then combines the source results into a unified XML result document. WIX WIX (Web Interface for XQuery) is a simple service that allows users to submit an XQuery to query an XML document. The servlet interface for submitting XQueries is simple and efficient and can easily be called from any programming language, other instances of XQuery, or an HTML form. WIX is used by UW SIG XBrain Project: XQuery the Brain Mapping Database
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XBrain Project

XQuery the Brain Mapping Database

Overview

[XBrain Public View Diagram]

XBrain is a web-based application designed to allow researchers to query SIG's Brain Mapping Database. The query language used is XQuery, and the resulting XML can be viewed directly or automatically transformed into HTML, CSV, or visualized on an image of brain regions.

How XBrain Works

XBrain is a JSP (Java Server Pages) application using SilkRoute as a backend to execute user-defined XQueries against a relational database.

Presentation Slides about XBrain

Publications

SIG Publications on XBrain
Last modified: Mar 3 2007