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MEBI 534 , Autumn 2007
Biology and Informatics

Cancer Informatics: Assignment

A. Read the following 

caBIG Primer
Sioutos NCI Thesaurus
Pan GridCAD


B.  Provide written answers to the following questions, to be turned in prior to the Wed class, as per these instructions.

  1. What is caBIG, and how is it organized?
  2. How does the NCI Thesaurus fit into caBIG?
  3. Give an example of how the NCI Thesaurus represents a particular type of cancer.
  4. What is caGRID, what are its primary components, and how does it fit into caBIG?
  5. Explain how caGRID is used to faciltate distributed computer assisted detection (CAD) of potentially cancerous nodules on medical images.